Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802618.1_cds_XP_016480181.1_7124
CDS Infomation

[gene=LOC107801374] [db_xref=GeneID:107801374] [protein=aspartic proteinase nepenthesin-2-like] [protein_id=XP_016480181.1] [location=3221..4678] [gbkey=CDS]
Sequence

ATGACAACACCTTTCTGCCTCTCAACTTGCTTCTTAATCTTCTCTTTTCTTTCTAGTGCA
TTGGTTCATGTTAACCAATGCTATGCTAAGGAAAAAAACCCTTCTTCTTCCTTGGTGTTA
AGTTTAAGTCGTTCGAAAAATAGCCTTTCGATTCCTAAGTCTTCGTATAACTTAGTGAAA
AAAACCTCAGAAACGTTGGACGGCGTAATTGAGCCATTAAGAGAAGTGAGAGATGGTTAT
TTGATAACTTTGAATTTGGGAACACCCCCACAAATTATCCAGGTTTATATGGATACAGGG
AGTGACCTTACTTGGGTACCTTGTGGAAACTTATCCTTTGATTGTATAGATTGTGATGAC
TATAAGAATCACAAGCTAATGTCAAGCTTCTCTCCTTCATTTTCATCTTCTTCCTCTAGG
GATTTTTGTGATAGTCACTATTGTATTAATATCCATAGCTCTGATAACCCTTTCGATCAA
TGCACAGTCGCCGGATGCTCTTTAAGTAGCCTACTTAAGGGCACTTGCTCAAGGCCATGT
CCTTCTTTTGCTTACACTTATGGTGAAGGTGTTGTAACTGGAACCCTAACTAAGGATACC
CTAAGAGTACACTCAAACCCTAATTCTAATATTAGGGAAGTCCAAAAGTTTGTATTTGGA
TGTGTTGGAACAACTTATAGAGAGCCTATTGGGATTGTAGGGTTTGGGAAAGGACCACTT
TCTTTACCTTCTCAATTAGGGTTTCTTCAAAAAGGTTTTTCACATTGCTTCTTGCCTTTC
AAGTTTGCAAATAATCCTAATATGTCTAGCCCTCTAGTTGTGGGTGAACAAGCCATTTTT
TCTAAAGAAAATTTTCAATTTACTCCTATGTTGAAAAGCTCTATGTACCCTAACTTCTAT
TACATTGGCCTAGAGGCCATAACTGTGGGGAATGGCGGTGCCACTACACAAGTACCCTTA
GCCTTGAGAGAATTTGATTCTTTAGGTAATGGAGGAATGTTGATTGATTCTGGAACCACA
TACACACACCTACCCGAGCCATTCTACTCGAATCTTCTCACCACCTTTCAATCATCAATA
AATTACACACGAGCAAAGGAAGCCGAGGCACAAACAGGATTTGATCTTTGTTATAGACTC
CCATGCCCTAATAACAACATTAATACTCTAGTTACCGATGATTTCCCTTTAATTACGTTC
CATTTCTTGAACAATGTGAGCCTTATTTTGCCCAATGGGAATAACTTCTATGCCATGGGT
GCACCAAGAAACTCAACGGTGGTGAAATGCTTGTTGTTCCAAAGCATGAAAGATTCTAAA
GAGGGGCCAGCTGGGATTTTTGGAAGCTTCCAACAACAAAATGTGGAAGTTGTGTATGAC
TTGGAGAGGGAAAGAATTGGGTTGCAAAACACTGATTGTGCCTCAGCTGCAGCTTCTCAA
GGACTTCACAAGAAATAA

Peptide Sequence

PEP ID

XP_016480181.1
PEP Infomation

PREDICTED: aspartic proteinase nepenthesin-2-like [Nicotiana tabacum]
Sequence

MTTPFCLSTCFLIFSFLSSALVHVNQCYAKEKNPSSSLVLSLSRSKNSLSIPKSSYNLVK
KTSETLDGVIEPLREVRDGYLITLNLGTPPQIIQVYMDTGSDLTWVPCGNLSFDCIDCDD
YKNHKLMSSFSPSFSSSSSRDFCDSHYCINIHSSDNPFDQCTVAGCSLSSLLKGTCSRPC
PSFAYTYGEGVVTGTLTKDTLRVHSNPNSNIREVQKFVFGCVGTTYREPIGIVGFGKGPL
SLPSQLGFLQKGFSHCFLPFKFANNPNMSSPLVVGEQAIFSKENFQFTPMLKSSMYPNFY
YIGLEAITVGNGGATTQVPLALREFDSLGNGGMLIDSGTTYTHLPEPFYSNLLTTFQSSI
NYTRAKEAEAQTGFDLCYRLPCPNNNINTLVTDDFPLITFHFLNNVSLILPNGNNFYAMG
APRNSTVVKCLLFQSMKDSKEGPAGIFGSFQQQNVEVVYDLERERIGLQNTDCASAAASQ
GLHKK

Transcript Sequence

Gene sequence data has not been registered.